- Edge Sum
- Given two sequence A and B, we find the shortest path from A to B in the tree and sum up values on edges along the path.

- Edge Count
- Given two sequence A and B, we find the shortest path from A to B and count the number of edges in it.

- Fungi 200 https://www.sugarsync.com/pf/D6858752_2739277_6854163
- 126 sequences (in reverse complemented form) represent the centers for clusters in http://salsahpc.indiana.edu/millionseq/haixu/fungi_index.html (note. restricted access)
- 74 sequences from GenBank

- Fungi 2133 https://www.sugarsync.com/pf/D6858752_0743775_6281705
- 126 sequences (in reverse complemented form) represent the centers for clusters in http://salsahpc.indiana.edu/millionseq/haixu/fungi_index.html (note. restricted access)
- 74 sequences from GenBank
- 988 sequences from Kruger et. al. dataset
- 945 sequences from Wittiya’s dataset

# Heatmaps for Fungi 200

3D DA-SMACOF of SWG PID Vs SWG PID | |

Edge Sum Ninja from SWG PID Vs 3D DA-SMACOF of SWG PID | Edge Sum Ninja from SWG PID Vs SWG PID |

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